![]() net.sf. INPUT=/home/merlevede/./././data/patient1/s_garma-fibros_converted_sorted.bam OUTPUT=/home/merlevede/./././data/patient1/picard_s_garma-fibros_converted_sorted.bam SORT_ORDER=coordinate RGID=garma-fibros RGLB=toto RGPL=illumina RGPU=tata RGSM=garma CREATE_INDEX=true VERBOSITY=INFO QUIET=false VALIDATION_STRINGENCY=STRICT COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_MD5_FILE=false > RGPL=illumina RGID=garma-fibros RGSM=garma RGLB=toto RGPU=tata > SORT_ORDER=coordinate CREATE_INDEX=true \ ![]() AddOrReplaceReadGroups.jar I=~/./././data/patient1/s_garma-fibros_converted_sorted.bam O=~/./././data/patient1/picard_s_garma-fibros_converted_sorted.bam \ ![]()
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